Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.16□□□□□ -0.14
Col8a2P25318 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.16□□□□□ -0.14
Col8a2P25318 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 AA414768-201ENSMUST00000121924 1257 ntBASIC14.16□□□□□ -0.14
Col8a2P25318 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.16□□□□□ -0.14
Col8a2P25318 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Col8a2P25318 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col8a2P25318 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col8a2P25318 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.15□□□□□ -0.14
Col8a2P25318 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.15□□□□□ -0.14
Col8a2P25318 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.15□□□□□ -0.14
Col8a2P25318 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.15□□□□□ -0.14
Col8a2P25318 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.15□□□□□ -0.14
Col8a2P25318 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Col8a2P25318 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
Col8a2P25318 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.15□□□□□ -0.14
Col8a2P25318 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col8a2P25318 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col8a2P25318 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col8a2P25318 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Gm26039-201ENSMUST00000158152 144 ntBASIC14.14□□□□□ -0.15
Col8a2P25318 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Mir1668-201ENSMUST00000184114 107 ntBASIC14.14□□□□□ -0.15
Col8a2P25318 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.14□□□□□ -0.15
Col8a2P25318 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.14□□□□□ -0.15
Col8a2P25318 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.14□□□□□ -0.15
Col8a2P25318 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Phf7-203ENSMUST00000226565 1971 ntBASIC14.14□□□□□ -0.15
Col8a2P25318 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col8a2P25318 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col8a2P25318 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Gm13474-201ENSMUST00000122466 815 ntBASIC14.13□□□□□ -0.15
Col8a2P25318 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col8a2P25318 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col8a2P25318 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col8a2P25318 Gm7367-201ENSMUST00000057611 492 ntBASIC14.13□□□□□ -0.15
Col8a2P25318 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col8a2P25318 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms