Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Cxcl1P12850 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.06□□□□□ -0.16
Cxcl1P12850 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl1P12850 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl1P12850 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.06□□□□□ -0.16
Cxcl1P12850 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.06□□□□□ -0.16
Cxcl1P12850 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cxcl1P12850 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl1P12850 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl1P12850 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl1P12850 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.05□□□□□ -0.16
Cxcl1P12850 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.05□□□□□ -0.16
Cxcl1P12850 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.05□□□□□ -0.16
Cxcl1P12850 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl1P12850 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl1P12850 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.04□□□□□ -0.16
Cxcl1P12850 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.04□□□□□ -0.16
Cxcl1P12850 Gm18284-201ENSMUST00000172604 624 ntBASIC14.04□□□□□ -0.16
Cxcl1P12850 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.04□□□□□ -0.16
Cxcl1P12850 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Dio3-201ENSMUST00000097228 1449 ntBASIC14.04□□□□□ -0.16
Cxcl1P12850 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.04□□□□□ -0.16
Cxcl1P12850 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.04□□□□□ -0.16
Cxcl1P12850 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl1P12850 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl1P12850 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl1P12850 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.03□□□□□ -0.16
Cxcl1P12850 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.03□□□□□ -0.16
Cxcl1P12850 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcl1P12850 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl1P12850 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms