Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RaraP11416 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.35■□□□□ 0.53
RaraP11416 Gm10698-201ENSMUST00000182663 604 ntBASIC18.35■□□□□ 0.53
RaraP11416 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
RaraP11416 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RaraP11416 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RaraP11416 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RaraP11416 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RaraP11416 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RaraP11416 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RaraP11416 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RaraP11416 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.34■□□□□ 0.53
RaraP11416 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.34■□□□□ 0.53
RaraP11416 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RaraP11416 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RaraP11416 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RaraP11416 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RaraP11416 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RaraP11416 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RaraP11416 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RaraP11416 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RaraP11416 Gm17661-201ENSMUST00000170317 270 ntBASIC18.33■□□□□ 0.52
RaraP11416 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RaraP11416 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RaraP11416 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.33■□□□□ 0.52
RaraP11416 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RaraP11416 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.32■□□□□ 0.52
RaraP11416 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RaraP11416 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RaraP11416 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RaraP11416 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.31■□□□□ 0.52
RaraP11416 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RaraP11416 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RaraP11416 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RaraP11416 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RaraP11416 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Gm15378-201ENSMUST00000121894 207 ntBASIC18.3■□□□□ 0.52
RaraP11416 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RaraP11416 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.29■□□□□ 0.52
RaraP11416 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Gm37025-201ENSMUST00000195159 829 ntBASIC18.29■□□□□ 0.52
RaraP11416 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.29■□□□□ 0.52
RaraP11416 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.29■□□□□ 0.52
RaraP11416 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RaraP11416 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RaraP11416 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms