Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccl3P10855 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.97□□□□□ -0.01
Ccl3P10855 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccl3P10855 Gm18421-201ENSMUST00000204122 625 ntBASIC14.97□□□□□ -0.01
Ccl3P10855 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccl3P10855 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccl3P10855 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccl3P10855 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccl3P10855 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.96□□□□□ -0.01
Ccl3P10855 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Ccl3P10855 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ccl3P10855 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.96□□□□□ -0.01
Ccl3P10855 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccl3P10855 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.96□□□□□ -0.01
Ccl3P10855 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.96□□□□□ -0.01
Ccl3P10855 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccl3P10855 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccl3P10855 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccl3P10855 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccl3P10855 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.95□□□□□ -0.02
Ccl3P10855 Gm12644-201ENSMUST00000119935 606 ntBASIC14.95□□□□□ -0.02
Ccl3P10855 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Gm18733-201ENSMUST00000173950 856 ntBASIC14.95□□□□□ -0.02
Ccl3P10855 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccl3P10855 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Gm18195-201ENSMUST00000207604 706 ntBASIC14.95□□□□□ -0.02
Ccl3P10855 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccl3P10855 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccl3P10855 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccl3P10855 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccl3P10855 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccl3P10855 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Ccl3P10855 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ccl3P10855 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.94□□□□□ -0.02
Ccl3P10855 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.94□□□□□ -0.02
Ccl3P10855 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ccl3P10855 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccl3P10855 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccl3P10855 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccl3P10855 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.93□□□□□ -0.02
Ccl3P10855 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccl3P10855 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccl3P10855 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms