Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.8■□□□□ 0.6
Hoxc6P10629 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Rps4l-201ENSMUST00000071745 943 ntBASIC18.8■□□□□ 0.6
Hoxc6P10629 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.8■□□□□ 0.6
Hoxc6P10629 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hoxc6P10629 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxc6P10629 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxc6P10629 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.79■□□□□ 0.6
Hoxc6P10629 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.79■□□□□ 0.6
Hoxc6P10629 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hoxc6P10629 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Hoxc6P10629 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hoxc6P10629 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.79■□□□□ 0.6
Hoxc6P10629 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.79■□□□□ 0.6
Hoxc6P10629 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc6P10629 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.78■□□□□ 0.6
Hoxc6P10629 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.78■□□□□ 0.6
Hoxc6P10629 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hoxc6P10629 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hoxc6P10629 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc6P10629 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.77■□□□□ 0.6
Hoxc6P10629 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.77■□□□□ 0.6
Hoxc6P10629 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Gm12644-201ENSMUST00000119935 606 ntBASIC18.77■□□□□ 0.6
Hoxc6P10629 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.77■□□□□ 0.6
Hoxc6P10629 Rprl3-201ENSMUST00000157400 290 ntBASIC18.77■□□□□ 0.6
Hoxc6P10629 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.77■□□□□ 0.6
Hoxc6P10629 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.77■□□□□ 0.6
Hoxc6P10629 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc6P10629 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc6P10629 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Hoxc6P10629 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc6P10629 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc6P10629 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hoxc6P10629 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Hoxc6P10629 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.76■□□□□ 0.59
Hoxc6P10629 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxc6P10629 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.76■□□□□ 0.59
Hoxc6P10629 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc6P10629 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.75■□□□□ 0.59
Hoxc6P10629 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc6P10629 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Hoxc6P10629 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hoxc6P10629 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc6P10629 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc6P10629 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc6P10629 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxc6P10629 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.75■□□□□ 0.59
Hoxc6P10629 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc6P10629 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hoxc6P10629 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc6P10629 Gm27525-201ENSMUST00000184465 107 ntBASIC18.75■□□□□ 0.59
Hoxc6P10629 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.75■□□□□ 0.59
Hoxc6P10629 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.75■□□□□ 0.59
Hoxc6P10629 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc6P10629 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Hoxc6P10629 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms