Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h2P0C090 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h2P0C090 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rc3h2P0C090 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h2P0C090 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h2P0C090 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rc3h2P0C090 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.24■□□□□ 0.35
Rc3h2P0C090 Gm27741-201ENSMUST00000185060 237 ntBASIC17.24■□□□□ 0.35
Rc3h2P0C090 Gm17807-201ENSMUST00000186869 298 ntBASIC17.24■□□□□ 0.35
Rc3h2P0C090 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rc3h2P0C090 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.24■□□□□ 0.35
Rc3h2P0C090 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rc3h2P0C090 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.23■□□□□ 0.35
Rc3h2P0C090 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rc3h2P0C090 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Gm45328-201ENSMUST00000210942 917 ntBASIC17.22■□□□□ 0.35
Rc3h2P0C090 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.22■□□□□ 0.35
Rc3h2P0C090 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h2P0C090 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Gm28033-201ENSMUST00000184224 96 ntBASIC17.21■□□□□ 0.35
Rc3h2P0C090 Gm27742-201ENSMUST00000184667 60 ntBASIC17.21■□□□□ 0.35
Rc3h2P0C090 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.21■□□□□ 0.35
Rc3h2P0C090 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.21■□□□□ 0.35
Rc3h2P0C090 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h2P0C090 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rc3h2P0C090 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.21■□□□□ 0.34
Rc3h2P0C090 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rc3h2P0C090 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms