Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxd3P09027 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxd3P09027 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Hoxd3P09027 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxd3P09027 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxd3P09027 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.17□□□□□ -0.3
Hoxd3P09027 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxd3P09027 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxd3P09027 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hoxd3P09027 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxd3P09027 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxd3P09027 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.16□□□□□ -0.3
Hoxd3P09027 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.16□□□□□ -0.3
Hoxd3P09027 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.16□□□□□ -0.3
Hoxd3P09027 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Gm21559-201ENSMUST00000220638 855 ntBASIC13.16□□□□□ -0.3
Hoxd3P09027 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Gm8587-201ENSMUST00000076538 843 ntBASIC13.16□□□□□ -0.3
Hoxd3P09027 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxd3P09027 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxd3P09027 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.16□□□□□ -0.3
Hoxd3P09027 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hoxd3P09027 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxd3P09027 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxd3P09027 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxd3P09027 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxd3P09027 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxd3P09027 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxd3P09027 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxd3P09027 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hoxd3P09027 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms