Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr2aP08775 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr2aP08775 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.34■□□□□ 0.69
Polr2aP08775 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.34■□□□□ 0.69
Polr2aP08775 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.33■□□□□ 0.69
Polr2aP08775 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.33■□□□□ 0.69
Polr2aP08775 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.33■□□□□ 0.69
Polr2aP08775 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Polr2aP08775 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr2aP08775 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.33■□□□□ 0.69
Polr2aP08775 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.33■□□□□ 0.69
Polr2aP08775 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Polr2aP08775 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr2aP08775 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.33■□□□□ 0.69
Polr2aP08775 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr2aP08775 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Polr2aP08775 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr2aP08775 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Polr2aP08775 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Polr2aP08775 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.33■□□□□ 0.68
Polr2aP08775 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Polr2aP08775 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr2aP08775 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Polr2aP08775 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Polr2aP08775 Gm13312-201ENSMUST00000119631 718 ntBASIC19.32■□□□□ 0.68
Polr2aP08775 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.32■□□□□ 0.68
Polr2aP08775 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr2aP08775 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.32■□□□□ 0.68
Polr2aP08775 Gm24513-201ENSMUST00000174964 138 ntBASIC19.32■□□□□ 0.68
Polr2aP08775 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.32■□□□□ 0.68
Polr2aP08775 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Polr2aP08775 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2aP08775 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2aP08775 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2aP08775 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2aP08775 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.31■□□□□ 0.68
Polr2aP08775 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Polr2aP08775 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr2aP08775 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Polr2aP08775 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Gm4535-201ENSMUST00000182274 558 ntBASIC19.3■□□□□ 0.68
Polr2aP08775 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.3■□□□□ 0.68
Polr2aP08775 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.3■□□□□ 0.68
Polr2aP08775 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Polr2aP08775 Gm10355-201ENSMUST00000097146 517 ntBASIC19.3■□□□□ 0.68
Polr2aP08775 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.3■□□□□ 0.68
Polr2aP08775 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.3■□□□□ 0.68
Polr2aP08775 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Polr2aP08775 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Polr2aP08775 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.3■□□□□ 0.68
Polr2aP08775 Auts2-212ENSMUST00000178555 309 ntBASIC19.3■□□□□ 0.68
Polr2aP08775 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Polr2aP08775 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Polr2aP08775 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.3■□□□□ 0.68
Polr2aP08775 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr2aP08775 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Polr2aP08775 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Gm4459-201ENSMUST00000118750 468 ntBASIC19.29■□□□□ 0.68
Polr2aP08775 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.29■□□□□ 0.68
Polr2aP08775 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.29■□□□□ 0.68
Polr2aP08775 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr2aP08775 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2aP08775 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr2aP08775 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms