Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.12■□□□□ 0.01
P06344 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
P06344 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
P06344 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
P06344 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.11■□□□□ 0.01
P06344 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P06344 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P06344 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
P06344 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.1■□□□□ 0.01
P06344 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
P06344 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
P06344 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P06344 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P06344 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.1■□□□□ 0.01
P06344 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
P06344 Gm6659-201ENSMUST00000174752 547 ntBASIC15.1■□□□□ 0.01
P06344 Gm22697-201ENSMUST00000175194 63 ntBASIC15.1■□□□□ 0.01
P06344 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.1■□□□□ 0.01
P06344 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
P06344 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.09■□□□□ 0.01
P06344 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
P06344 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Gm18958-201ENSMUST00000174258 762 ntBASIC15.09■□□□□ 0.01
P06344 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.09■□□□□ 0.01
P06344 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.09■□□□□ 0.01
P06344 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
P06344 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
P06344 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.09■□□□□ 0.01
P06344 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P06344 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
P06344 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
P06344 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
P06344 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.08■□□□□ 0
P06344 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
P06344 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.08■□□□□ 0
P06344 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
P06344 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P06344 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.08■□□□□ 0
P06344 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
P06344 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.08■□□□□ 0
P06344 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
P06344 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
P06344 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.08■□□□□ 0
P06344 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P06344 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
P06344 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.08■□□□□ 0
P06344 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P06344 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.07■□□□□ 0
P06344 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P06344 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P06344 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.07■□□□□ 0
P06344 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.07■□□□□ 0
P06344 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.07■□□□□ 0
P06344 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.07■□□□□ 0
P06344 Mir1668-201ENSMUST00000184114 107 ntBASIC15.07■□□□□ 0
P06344 Gm7213-201ENSMUST00000215977 950 ntBASIC15.07■□□□□ 0
P06344 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.07■□□□□ 0
P06344 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
P06344 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.07■□□□□ 0
P06344 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms