Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PrnpP04925 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.57■□□□□ 0.4
PrnpP04925 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.57■□□□□ 0.4
PrnpP04925 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrnpP04925 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PrnpP04925 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.56■□□□□ 0.4
PrnpP04925 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PrnpP04925 Gm10052-201ENSMUST00000168019 960 ntBASIC17.56■□□□□ 0.4
PrnpP04925 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Gm7729-201ENSMUST00000050143 801 ntBASIC17.56■□□□□ 0.4
PrnpP04925 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PrnpP04925 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.56■□□□□ 0.4
PrnpP04925 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PrnpP04925 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PrnpP04925 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PrnpP04925 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.55■□□□□ 0.4
PrnpP04925 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.55■□□□□ 0.4
PrnpP04925 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.55■□□□□ 0.4
PrnpP04925 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PrnpP04925 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PrnpP04925 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.55■□□□□ 0.4
PrnpP04925 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.55■□□□□ 0.4
PrnpP04925 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PrnpP04925 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PrnpP04925 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.54■□□□□ 0.4
PrnpP04925 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrnpP04925 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PrnpP04925 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PrnpP04925 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PrnpP04925 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PrnpP04925 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PrnpP04925 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PrnpP04925 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PrnpP04925 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.53■□□□□ 0.4
PrnpP04925 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PrnpP04925 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.53■□□□□ 0.4
PrnpP04925 Rprl3-201ENSMUST00000157400 290 ntBASIC17.53■□□□□ 0.4
PrnpP04925 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.53■□□□□ 0.4
PrnpP04925 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.53■□□□□ 0.4
PrnpP04925 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PrnpP04925 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
PrnpP04925 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
PrnpP04925 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PrnpP04925 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PrnpP04925 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.53■□□□□ 0.4
PrnpP04925 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PrnpP04925 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
PrnpP04925 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms