Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a1P02463 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a1P02463 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.84■□□□□ 0.93
Col4a1P02463 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.84■□□□□ 0.93
Col4a1P02463 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a1P02463 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a1P02463 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a1P02463 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a1P02463 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col4a1P02463 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col4a1P02463 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.83■□□□□ 0.93
Col4a1P02463 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Col4a1P02463 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Col4a1P02463 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a1P02463 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.83■□□□□ 0.92
Col4a1P02463 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.83■□□□□ 0.92
Col4a1P02463 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.83■□□□□ 0.92
Col4a1P02463 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a1P02463 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a1P02463 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a1P02463 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a1P02463 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.82■□□□□ 0.92
Col4a1P02463 Gm6296-201ENSMUST00000222599 943 ntBASIC20.82■□□□□ 0.92
Col4a1P02463 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a1P02463 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a1P02463 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a1P02463 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.81■□□□□ 0.92
Col4a1P02463 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.81■□□□□ 0.92
Col4a1P02463 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.81■□□□□ 0.92
Col4a1P02463 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col4a1P02463 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a1P02463 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Col4a1P02463 Gm10052-201ENSMUST00000168019 960 ntBASIC20.8■□□□□ 0.92
Col4a1P02463 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Col4a1P02463 Gm7729-201ENSMUST00000050143 801 ntBASIC20.8■□□□□ 0.92
Col4a1P02463 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a1P02463 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.8■□□□□ 0.92
Col4a1P02463 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Col4a1P02463 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Col4a1P02463 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.79■□□□□ 0.92
Col4a1P02463 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col4a1P02463 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col4a1P02463 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Col4a1P02463 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
Col4a1P02463 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a1P02463 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.79■□□□□ 0.92
Col4a1P02463 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Col4a1P02463 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.78■□□□□ 0.92
Col4a1P02463 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Col4a1P02463 Gm15165-201ENSMUST00000118140 502 ntBASIC20.78■□□□□ 0.92
Col4a1P02463 Gm13312-201ENSMUST00000119631 718 ntBASIC20.78■□□□□ 0.92
Col4a1P02463 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.78■□□□□ 0.92
Col4a1P02463 Gm43514-201ENSMUST00000198852 424 ntBASIC20.78■□□□□ 0.92
Col4a1P02463 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.78■□□□□ 0.92
Col4a1P02463 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a1P02463 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col4a1P02463 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms