Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tp53P02340 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tp53P02340 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tp53P02340 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tp53P02340 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tp53P02340 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tp53P02340 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.33■□□□□ 0.53
Tp53P02340 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.33■□□□□ 0.52
Tp53P02340 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.33■□□□□ 0.52
Tp53P02340 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.33■□□□□ 0.52
Tp53P02340 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.33■□□□□ 0.52
Tp53P02340 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tp53P02340 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tp53P02340 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.32■□□□□ 0.52
Tp53P02340 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tp53P02340 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.32■□□□□ 0.52
Tp53P02340 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.32■□□□□ 0.52
Tp53P02340 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.32■□□□□ 0.52
Tp53P02340 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tp53P02340 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tp53P02340 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.31■□□□□ 0.52
Tp53P02340 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.31■□□□□ 0.52
Tp53P02340 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.31■□□□□ 0.52
Tp53P02340 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tp53P02340 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tp53P02340 Gm13216-201ENSMUST00000117145 591 ntBASIC18.31■□□□□ 0.52
Tp53P02340 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tp53P02340 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.31■□□□□ 0.52
Tp53P02340 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tp53P02340 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tp53P02340 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tp53P02340 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tp53P02340 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tp53P02340 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Tp53P02340 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tp53P02340 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Tp53P02340 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tp53P02340 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tp53P02340 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tp53P02340 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tp53P02340 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tp53P02340 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tp53P02340 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.29■□□□□ 0.52
Tp53P02340 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.29■□□□□ 0.52
Tp53P02340 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Tp53P02340 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.29■□□□□ 0.52
Tp53P02340 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Gm9987-201ENSMUST00000069768 567 ntBASIC18.29■□□□□ 0.52
Tp53P02340 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.29■□□□□ 0.52
Tp53P02340 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tp53P02340 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Tp53P02340 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tp53P02340 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tp53P02340 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tp53P02340 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tp53P02340 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tp53P02340 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tp53P02340 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tp53P02340 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tp53P02340 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.28■□□□□ 0.52
Tp53P02340 Gm18958-201ENSMUST00000174258 762 ntBASIC18.28■□□□□ 0.52
Tp53P02340 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms