Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.15■□□□□ 0.34
Sp1O89090 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sp1O89090 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sp1O89090 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sp1O89090 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 Gm6623-201ENSMUST00000173570 544 ntBASIC17.15■□□□□ 0.34
Sp1O89090 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.15■□□□□ 0.34
Sp1O89090 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sp1O89090 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp1O89090 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sp1O89090 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sp1O89090 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sp1O89090 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sp1O89090 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sp1O89090 Gm11950-201ENSMUST00000121615 838 ntBASIC17.14■□□□□ 0.33
Sp1O89090 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.14■□□□□ 0.33
Sp1O89090 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.14■□□□□ 0.33
Sp1O89090 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.14■□□□□ 0.33
Sp1O89090 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp1O89090 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sp1O89090 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Gm14859-201ENSMUST00000117752 357 ntBASIC17.13■□□□□ 0.33
Sp1O89090 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Sp1O89090 Gm27704-201ENSMUST00000185094 107 ntBASIC17.13■□□□□ 0.33
Sp1O89090 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.13■□□□□ 0.33
Sp1O89090 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sp1O89090 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.13■□□□□ 0.33
Sp1O89090 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Sp1O89090 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp1O89090 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Sp1O89090 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.12■□□□□ 0.33
Sp1O89090 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.12■□□□□ 0.33
Sp1O89090 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Gm18115-201ENSMUST00000221209 621 ntBASIC17.12■□□□□ 0.33
Sp1O89090 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.12■□□□□ 0.33
Sp1O89090 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Sp1O89090 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp1O89090 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.11■□□□□ 0.33
Sp1O89090 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sp1O89090 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.11■□□□□ 0.33
Sp1O89090 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.11■□□□□ 0.33
Sp1O89090 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Sp1O89090 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sp1O89090 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.1■□□□□ 0.33
Sp1O89090 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Sp1O89090 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.1■□□□□ 0.33
Sp1O89090 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sp1O89090 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms