Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CopeO89079 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.54■□□□□ 0.4
CopeO89079 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.53■□□□□ 0.4
CopeO89079 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.53■□□□□ 0.4
CopeO89079 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.53■□□□□ 0.4
CopeO89079 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CopeO89079 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CopeO89079 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CopeO89079 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.52■□□□□ 0.4
CopeO89079 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.52■□□□□ 0.4
CopeO89079 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CopeO89079 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CopeO89079 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.52■□□□□ 0.4
CopeO89079 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CopeO89079 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CopeO89079 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CopeO89079 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.51■□□□□ 0.39
CopeO89079 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CopeO89079 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CopeO89079 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.51■□□□□ 0.39
CopeO89079 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CopeO89079 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CopeO89079 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CopeO89079 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.5■□□□□ 0.39
CopeO89079 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CopeO89079 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CopeO89079 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.49■□□□□ 0.39
CopeO89079 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.49■□□□□ 0.39
CopeO89079 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CopeO89079 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CopeO89079 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CopeO89079 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CopeO89079 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CopeO89079 Dio3-201ENSMUST00000097228 1449 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms