Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Hdac3O88895 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.17■□□□□ 0.02
Hdac3O88895 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.17■□□□□ 0.02
Hdac3O88895 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.17■□□□□ 0.02
Hdac3O88895 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac3O88895 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.16■□□□□ 0.02
Hdac3O88895 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.16■□□□□ 0.02
Hdac3O88895 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.16■□□□□ 0.02
Hdac3O88895 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Gm37292-201ENSMUST00000192062 758 ntBASIC15.16■□□□□ 0.02
Hdac3O88895 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.16■□□□□ 0.02
Hdac3O88895 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.16■□□□□ 0.02
Hdac3O88895 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hdac3O88895 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hdac3O88895 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Hdac3O88895 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hdac3O88895 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hdac3O88895 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Hdac3O88895 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hdac3O88895 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hdac3O88895 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Hdac3O88895 Gm13168-201ENSMUST00000121771 632 ntBASIC15.15■□□□□ 0.02
Hdac3O88895 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Gm42545-201ENSMUST00000202755 922 ntBASIC15.15■□□□□ 0.02
Hdac3O88895 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hdac3O88895 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hdac3O88895 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hdac3O88895 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hdac3O88895 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.14■□□□□ 0.01
Hdac3O88895 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac3O88895 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hdac3O88895 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.13■□□□□ 0.01
Hdac3O88895 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Hdac3O88895 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.13■□□□□ 0.01
Hdac3O88895 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Gm13216-201ENSMUST00000117145 591 ntBASIC15.13■□□□□ 0.01
Hdac3O88895 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac3O88895 Gm43183-201ENSMUST00000200632 547 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms