Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Gm29707-201ENSMUST00000196325 491 ntBASIC18.47■□□□□ 0.55
Slc6a20bO88575 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.47■□□□□ 0.55
Slc6a20bO88575 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a20bO88575 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Mir5126-201ENSMUST00000175513 77 ntBASIC18.46■□□□□ 0.55
Slc6a20bO88575 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a20bO88575 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Slc6a20bO88575 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.45■□□□□ 0.54
Slc6a20bO88575 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Gm6736-201ENSMUST00000166583 948 ntBASIC18.45■□□□□ 0.54
Slc6a20bO88575 Gm18421-201ENSMUST00000204122 625 ntBASIC18.45■□□□□ 0.54
Slc6a20bO88575 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.45■□□□□ 0.54
Slc6a20bO88575 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.45■□□□□ 0.54
Slc6a20bO88575 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Gm15467-201ENSMUST00000120582 445 ntBASIC18.44■□□□□ 0.54
Slc6a20bO88575 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Slc6a20bO88575 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.44■□□□□ 0.54
Slc6a20bO88575 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.44■□□□□ 0.54
Slc6a20bO88575 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a20bO88575 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.43■□□□□ 0.54
Slc6a20bO88575 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.43■□□□□ 0.54
Slc6a20bO88575 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a20bO88575 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms