Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cldn1O88551 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cldn1O88551 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cldn1O88551 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cldn1O88551 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cldn1O88551 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cldn1O88551 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cldn1O88551 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cldn1O88551 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cldn1O88551 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cldn1O88551 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.52□□□□□ -0.09
Cldn1O88551 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.52□□□□□ -0.09
Cldn1O88551 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cldn1O88551 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.52□□□□□ -0.09
Cldn1O88551 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cldn1O88551 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.52□□□□□ -0.09
Cldn1O88551 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldn1O88551 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.51□□□□□ -0.09
Cldn1O88551 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cldn1O88551 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.51□□□□□ -0.09
Cldn1O88551 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Cldn1O88551 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cldn1O88551 Gm9731-201ENSMUST00000209480 747 ntBASIC14.51□□□□□ -0.09
Cldn1O88551 Il3ra-202ENSMUST00000223589 738 ntBASIC14.51□□□□□ -0.09
Cldn1O88551 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Birc2-201ENSMUST00000054878 378 ntBASIC14.51□□□□□ -0.09
Cldn1O88551 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cldn1O88551 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cldn1O88551 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldn1O88551 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.5□□□□□ -0.09
Cldn1O88551 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.5□□□□□ -0.09
Cldn1O88551 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Cldn1O88551 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cldn1O88551 Olfr129-201ENSMUST00000122318 993 ntBASIC14.5□□□□□ -0.09
Cldn1O88551 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.5□□□□□ -0.09
Cldn1O88551 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.5□□□□□ -0.09
Cldn1O88551 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Cldn1O88551 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.5□□□□□ -0.09
Cldn1O88551 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cldn1O88551 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cldn1O88551 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldn1O88551 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cldn1O88551 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cldn1O88551 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.49□□□□□ -0.09
Cldn1O88551 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.49□□□□□ -0.09
Cldn1O88551 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.49□□□□□ -0.09
Cldn1O88551 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.49□□□□□ -0.09
Cldn1O88551 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldn1O88551 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms