Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.7■□□□□ 0.9
Cops6O88545 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.7■□□□□ 0.9
Cops6O88545 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cops6O88545 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.7■□□□□ 0.9
Cops6O88545 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cops6O88545 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cops6O88545 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.69■□□□□ 0.9
Cops6O88545 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cops6O88545 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Cops6O88545 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Cops6O88545 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Cops6O88545 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cops6O88545 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.69■□□□□ 0.9
Cops6O88545 Gm29707-201ENSMUST00000196325 491 ntBASIC20.69■□□□□ 0.9
Cops6O88545 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.69■□□□□ 0.9
Cops6O88545 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cops6O88545 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cops6O88545 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.68■□□□□ 0.9
Cops6O88545 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cops6O88545 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Cops6O88545 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cops6O88545 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.68■□□□□ 0.9
Cops6O88545 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cops6O88545 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cops6O88545 Birc2-201ENSMUST00000054878 378 ntBASIC20.68■□□□□ 0.9
Cops6O88545 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cops6O88545 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cops6O88545 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cops6O88545 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.67■□□□□ 0.9
Cops6O88545 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cops6O88545 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.67■□□□□ 0.9
Cops6O88545 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Cops6O88545 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cops6O88545 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.67■□□□□ 0.9
Cops6O88545 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cops6O88545 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cops6O88545 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cops6O88545 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.66■□□□□ 0.9
Cops6O88545 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops6O88545 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cops6O88545 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops6O88545 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops6O88545 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.66■□□□□ 0.9
Cops6O88545 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cops6O88545 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Gm12895-201ENSMUST00000122214 226 ntBASIC20.65■□□□□ 0.9
Cops6O88545 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.65■□□□□ 0.9
Cops6O88545 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.65■□□□□ 0.9
Cops6O88545 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cops6O88545 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cops6O88545 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Cops6O88545 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Cops6O88545 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops6O88545 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops6O88545 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops6O88545 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops6O88545 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.64■□□□□ 0.89
Cops6O88545 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.64■□□□□ 0.89
Cops6O88545 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cops6O88545 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.64■□□□□ 0.89
Cops6O88545 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops6O88545 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cops6O88545 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cops6O88545 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cops6O88545 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.63■□□□□ 0.89
Cops6O88545 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.63■□□□□ 0.89
Cops6O88545 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cops6O88545 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cops6O88545 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Cops6O88545 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Cops6O88545 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms