Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.69■□□□□ 0.1
Cops4O88544 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.69■□□□□ 0.1
Cops4O88544 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cops4O88544 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cops4O88544 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cops4O88544 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.68■□□□□ 0.1
Cops4O88544 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cops4O88544 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.68■□□□□ 0.1
Cops4O88544 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.68■□□□□ 0.1
Cops4O88544 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cops4O88544 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cops4O88544 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cops4O88544 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops4O88544 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.67■□□□□ 0.1
Cops4O88544 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.67■□□□□ 0.1
Cops4O88544 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cops4O88544 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.67■□□□□ 0.1
Cops4O88544 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cops4O88544 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.67■□□□□ 0.1
Cops4O88544 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cops4O88544 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops4O88544 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cops4O88544 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cops4O88544 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.66■□□□□ 0.1
Cops4O88544 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cops4O88544 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cops4O88544 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.66■□□□□ 0.1
Cops4O88544 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.66■□□□□ 0.1
Cops4O88544 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.66■□□□□ 0.1
Cops4O88544 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Cops4O88544 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cops4O88544 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops4O88544 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cops4O88544 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.65■□□□□ 0.1
Cops4O88544 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
Cops4O88544 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.65■□□□□ 0.1
Cops4O88544 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Gm27405-201ENSMUST00000184201 112 ntBASIC15.65■□□□□ 0.1
Cops4O88544 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops4O88544 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms