Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim3O70209 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim3O70209 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.4■□□□□ 0.06
Pdlim3O70209 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdlim3O70209 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdlim3O70209 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim3O70209 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim3O70209 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdlim3O70209 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim3O70209 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Gm15375-201ENSMUST00000119510 849 ntBASIC15.39■□□□□ 0.05
Pdlim3O70209 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.39■□□□□ 0.05
Pdlim3O70209 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pdlim3O70209 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Pdlim3O70209 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pdlim3O70209 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.39■□□□□ 0.05
Pdlim3O70209 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim3O70209 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pdlim3O70209 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.38■□□□□ 0.05
Pdlim3O70209 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.38■□□□□ 0.05
Pdlim3O70209 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.38■□□□□ 0.05
Pdlim3O70209 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Mir5133-201ENSMUST00000174955 77 ntBASIC15.38■□□□□ 0.05
Pdlim3O70209 Gm42569-201ENSMUST00000200539 472 ntBASIC15.38■□□□□ 0.05
Pdlim3O70209 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.38■□□□□ 0.05
Pdlim3O70209 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pdlim3O70209 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pdlim3O70209 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim3O70209 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pdlim3O70209 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pdlim3O70209 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.37■□□□□ 0.05
Pdlim3O70209 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pdlim3O70209 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pdlim3O70209 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pdlim3O70209 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 Dancr-204ENSMUST00000132389 2347 ntBASIC15.37■□□□□ 0.05
Pdlim3O70209 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim3O70209 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pdlim3O70209 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim3O70209 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms