Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp8O70138 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp8O70138 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Mmp8O70138 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp8O70138 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.68■□□□□ 0.9
Mmp8O70138 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Mmp8O70138 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp8O70138 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp8O70138 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Mmp8O70138 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.68■□□□□ 0.9
Mmp8O70138 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Mmp8O70138 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp8O70138 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp8O70138 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.67■□□□□ 0.9
Mmp8O70138 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Mmp8O70138 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Phf7-203ENSMUST00000226565 1971 ntBASIC20.67■□□□□ 0.9
Mmp8O70138 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.67■□□□□ 0.9
Mmp8O70138 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.67■□□□□ 0.9
Mmp8O70138 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Mmp8O70138 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Mmp8O70138 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Mmp8O70138 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp8O70138 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Mmp8O70138 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.66■□□□□ 0.9
Mmp8O70138 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.66■□□□□ 0.9
Mmp8O70138 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mmp8O70138 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.66■□□□□ 0.9
Mmp8O70138 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mmp8O70138 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.66■□□□□ 0.9
Mmp8O70138 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp8O70138 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.65■□□□□ 0.9
Mmp8O70138 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp8O70138 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.65■□□□□ 0.9
Mmp8O70138 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mmp8O70138 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mmp8O70138 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp8O70138 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp8O70138 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.64■□□□□ 0.9
Mmp8O70138 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp8O70138 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp8O70138 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp8O70138 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.64■□□□□ 0.89
Mmp8O70138 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp8O70138 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp8O70138 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp8O70138 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp8O70138 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp8O70138 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mmp8O70138 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mmp8O70138 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.63■□□□□ 0.89
Mmp8O70138 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.63■□□□□ 0.89
Mmp8O70138 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mmp8O70138 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.63■□□□□ 0.89
Mmp8O70138 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms