Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.65■□□□□ 0.58
Trdmt1O55055 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trdmt1O55055 Gm7729-201ENSMUST00000050143 801 ntBASIC18.65■□□□□ 0.58
Trdmt1O55055 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trdmt1O55055 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trdmt1O55055 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trdmt1O55055 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.64■□□□□ 0.58
Trdmt1O55055 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trdmt1O55055 Gm13312-201ENSMUST00000119631 718 ntBASIC18.64■□□□□ 0.57
Trdmt1O55055 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trdmt1O55055 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdmt1O55055 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdmt1O55055 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdmt1O55055 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdmt1O55055 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdmt1O55055 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trdmt1O55055 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdmt1O55055 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trdmt1O55055 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trdmt1O55055 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trdmt1O55055 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdmt1O55055 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trdmt1O55055 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.62■□□□□ 0.57
Trdmt1O55055 Gm12644-201ENSMUST00000119935 606 ntBASIC18.62■□□□□ 0.57
Trdmt1O55055 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.62■□□□□ 0.57
Trdmt1O55055 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdmt1O55055 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.61■□□□□ 0.57
Trdmt1O55055 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.61■□□□□ 0.57
Trdmt1O55055 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trdmt1O55055 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Trdmt1O55055 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.61■□□□□ 0.57
Trdmt1O55055 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.61■□□□□ 0.57
Trdmt1O55055 Rprl3-201ENSMUST00000157400 290 ntBASIC18.61■□□□□ 0.57
Trdmt1O55055 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.61■□□□□ 0.57
Trdmt1O55055 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 AW822252-206ENSMUST00000208904 237 ntBASIC18.61■□□□□ 0.57
Trdmt1O55055 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trdmt1O55055 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trdmt1O55055 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdmt1O55055 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trdmt1O55055 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.6■□□□□ 0.57
Trdmt1O55055 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.6■□□□□ 0.57
Trdmt1O55055 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trdmt1O55055 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.59■□□□□ 0.57
Trdmt1O55055 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Gm18733-201ENSMUST00000173950 856 ntBASIC18.59■□□□□ 0.57
Trdmt1O55055 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.59■□□□□ 0.57
Trdmt1O55055 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.59■□□□□ 0.57
Trdmt1O55055 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdmt1O55055 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms