Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.68■□□□□ 0.58
Prom1O54990 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.68■□□□□ 0.58
Prom1O54990 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prom1O54990 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prom1O54990 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.67■□□□□ 0.58
Prom1O54990 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Prom1O54990 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.67■□□□□ 0.58
Prom1O54990 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Prom1O54990 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prom1O54990 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.67■□□□□ 0.58
Prom1O54990 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.66■□□□□ 0.58
Prom1O54990 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Prom1O54990 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 Gm28659-201ENSMUST00000188013 759 ntBASIC18.66■□□□□ 0.58
Prom1O54990 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prom1O54990 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prom1O54990 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prom1O54990 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.65■□□□□ 0.58
Prom1O54990 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prom1O54990 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Prom1O54990 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.65■□□□□ 0.58
Prom1O54990 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.65■□□□□ 0.58
Prom1O54990 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.65■□□□□ 0.58
Prom1O54990 Gm18421-201ENSMUST00000204122 625 ntBASIC18.65■□□□□ 0.58
Prom1O54990 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.65■□□□□ 0.58
Prom1O54990 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prom1O54990 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prom1O54990 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prom1O54990 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.65■□□□□ 0.58
Prom1O54990 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.65■□□□□ 0.58
Prom1O54990 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prom1O54990 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prom1O54990 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prom1O54990 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prom1O54990 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prom1O54990 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.64■□□□□ 0.57
Prom1O54990 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prom1O54990 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.64■□□□□ 0.57
Prom1O54990 AW822252-206ENSMUST00000208904 237 ntBASIC18.64■□□□□ 0.57
Prom1O54990 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.64■□□□□ 0.57
Prom1O54990 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prom1O54990 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prom1O54990 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prom1O54990 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.63■□□□□ 0.57
Prom1O54990 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Prom1O54990 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.63■□□□□ 0.57
Prom1O54990 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prom1O54990 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Mir8098-201ENSMUST00000184011 137 ntBASIC18.63■□□□□ 0.57
Prom1O54990 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.63■□□□□ 0.57
Prom1O54990 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prom1O54990 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Prom1O54990 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prom1O54990 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prom1O54990 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.62■□□□□ 0.57
Prom1O54990 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms