Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ChkaO54804 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ChkaO54804 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.12■□□□□ 0.33
ChkaO54804 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ChkaO54804 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Gm17661-201ENSMUST00000170317 270 ntBASIC17.12■□□□□ 0.33
ChkaO54804 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.12■□□□□ 0.33
ChkaO54804 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ChkaO54804 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ChkaO54804 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ChkaO54804 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ChkaO54804 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.11■□□□□ 0.33
ChkaO54804 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ChkaO54804 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ChkaO54804 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ChkaO54804 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.11■□□□□ 0.33
ChkaO54804 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ChkaO54804 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.1■□□□□ 0.33
ChkaO54804 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Gm37025-201ENSMUST00000195159 829 ntBASIC17.1■□□□□ 0.33
ChkaO54804 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ChkaO54804 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.1■□□□□ 0.33
ChkaO54804 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ChkaO54804 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.1■□□□□ 0.33
ChkaO54804 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ChkaO54804 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ChkaO54804 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Gm12085-201ENSMUST00000119263 940 ntBASIC17.09■□□□□ 0.33
ChkaO54804 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ChkaO54804 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.09■□□□□ 0.33
ChkaO54804 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Gm20760-201ENSMUST00000179197 648 ntBASIC17.09■□□□□ 0.33
ChkaO54804 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.09■□□□□ 0.33
ChkaO54804 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ChkaO54804 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms