Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per1O35973 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.4■□□□□ 0.54
Per1O35973 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.4■□□□□ 0.54
Per1O35973 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.4■□□□□ 0.54
Per1O35973 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per1O35973 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per1O35973 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per1O35973 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Per1O35973 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Per1O35973 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Per1O35973 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Per1O35973 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.39■□□□□ 0.53
Per1O35973 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.39■□□□□ 0.53
Per1O35973 Gm17808-201ENSMUST00000200859 894 ntBASIC18.39■□□□□ 0.53
Per1O35973 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Per1O35973 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.39■□□□□ 0.53
Per1O35973 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Per1O35973 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Per1O35973 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Per1O35973 Gm11950-201ENSMUST00000121615 838 ntBASIC18.38■□□□□ 0.53
Per1O35973 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Per1O35973 Gm18421-201ENSMUST00000204122 625 ntBASIC18.38■□□□□ 0.53
Per1O35973 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Per1O35973 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.38■□□□□ 0.53
Per1O35973 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Per1O35973 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Per1O35973 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.37■□□□□ 0.53
Per1O35973 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.37■□□□□ 0.53
Per1O35973 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Per1O35973 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.37■□□□□ 0.53
Per1O35973 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Per1O35973 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.36■□□□□ 0.53
Per1O35973 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.36■□□□□ 0.53
Per1O35973 Gm6623-201ENSMUST00000173570 544 ntBASIC18.36■□□□□ 0.53
Per1O35973 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Per1O35973 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Per1O35973 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Per1O35973 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.35■□□□□ 0.53
Per1O35973 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Per1O35973 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.35■□□□□ 0.53
Per1O35973 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.35■□□□□ 0.53
Per1O35973 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.35■□□□□ 0.53
Per1O35973 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Per1O35973 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Per1O35973 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Per1O35973 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Per1O35973 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.34■□□□□ 0.53
Per1O35973 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms