Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lsm2O35900 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Lsm2O35900 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.14■□□□□ 0.01
Lsm2O35900 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lsm2O35900 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm2O35900 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lsm2O35900 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm2O35900 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
Lsm2O35900 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.13■□□□□ 0.01
Lsm2O35900 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Lsm2O35900 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.13■□□□□ 0.01
Lsm2O35900 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.13■□□□□ 0.01
Lsm2O35900 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm2O35900 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Gm6365-201ENSMUST00000054711 744 ntBASIC15.13■□□□□ 0.01
Lsm2O35900 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Lsm2O35900 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.13■□□□□ 0.01
Lsm2O35900 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lsm2O35900 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm2O35900 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.12■□□□□ 0.01
Lsm2O35900 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.12■□□□□ 0.01
Lsm2O35900 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lsm2O35900 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Mtag2-201ENSMUST00000058665 714 ntBASIC15.12■□□□□ 0.01
Lsm2O35900 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.12■□□□□ 0.01
Lsm2O35900 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.12■□□□□ 0.01
Lsm2O35900 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lsm2O35900 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lsm2O35900 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm2O35900 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.11■□□□□ 0.01
Lsm2O35900 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm2O35900 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Lsm2O35900 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lsm2O35900 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Mir6349-201ENSMUST00000184059 97 ntBASIC15.11■□□□□ 0.01
Lsm2O35900 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.11■□□□□ 0.01
Lsm2O35900 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.11■□□□□ 0.01
Lsm2O35900 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lsm2O35900 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lsm2O35900 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm2O35900 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm2O35900 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm2O35900 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms