Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Efnb3O35393 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.42□□□□□ -0.26
Efnb3O35393 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Efnb3O35393 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Efnb3O35393 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.42□□□□□ -0.26
Efnb3O35393 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Gm10602-201ENSMUST00000098239 609 ntBASIC13.42□□□□□ -0.26
Efnb3O35393 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Efnb3O35393 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Efnb3O35393 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Efnb3O35393 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Efnb3O35393 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.42□□□□□ -0.26
Efnb3O35393 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Efnb3O35393 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Efnb3O35393 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Efnb3O35393 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.41□□□□□ -0.26
Efnb3O35393 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.41□□□□□ -0.26
Efnb3O35393 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Flg-201ENSMUST00000050758 1488 ntBASIC13.41□□□□□ -0.26
Efnb3O35393 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Efnb3O35393 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Efnb3O35393 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.4□□□□□ -0.26
Efnb3O35393 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.4□□□□□ -0.26
Efnb3O35393 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Efnb3O35393 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Efnb3O35393 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.4□□□□□ -0.26
Efnb3O35393 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Efnb3O35393 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Efnb3O35393 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Efnb3O35393 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Efnb3O35393 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.39□□□□□ -0.27
Efnb3O35393 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Efnb3O35393 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms