Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx4O35137 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.13■□□□□ 0.01
Alx4O35137 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.13■□□□□ 0.01
Alx4O35137 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.13■□□□□ 0.01
Alx4O35137 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.13■□□□□ 0.01
Alx4O35137 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.13■□□□□ 0.01
Alx4O35137 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Alx4O35137 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.13■□□□□ 0.01
Alx4O35137 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Alx4O35137 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Alx4O35137 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Alx4O35137 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Alx4O35137 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Alx4O35137 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.12■□□□□ 0.01
Alx4O35137 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Alx4O35137 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Alx4O35137 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Alx4O35137 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.12■□□□□ 0.01
Alx4O35137 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alx4O35137 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.11■□□□□ 0.01
Alx4O35137 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Alx4O35137 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.11■□□□□ 0.01
Alx4O35137 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Alx4O35137 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alx4O35137 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.11■□□□□ 0.01
Alx4O35137 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.1■□□□□ 0.01
Alx4O35137 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.1■□□□□ 0.01
Alx4O35137 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.1■□□□□ 0.01
Alx4O35137 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.1■□□□□ 0.01
Alx4O35137 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Alx4O35137 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alx4O35137 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Alx4O35137 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Alx4O35137 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms