Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pkd1O08852 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pkd1O08852 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Gm44430-201ENSMUST00000203376 995 ntBASIC10.74□□□□□ -0.69
Pkd1O08852 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.74□□□□□ -0.69
Pkd1O08852 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pkd1O08852 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pkd1O08852 Gm6089-201ENSMUST00000197666 938 ntBASIC10.73□□□□□ -0.69
Pkd1O08852 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.73□□□□□ -0.69
Pkd1O08852 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pkd1O08852 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pkd1O08852 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Gm7506-201ENSMUST00000207758 815 ntBASIC10.73□□□□□ -0.69
Pkd1O08852 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.73□□□□□ -0.69
Pkd1O08852 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pkd1O08852 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pkd1O08852 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.72□□□□□ -0.69
Pkd1O08852 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.72□□□□□ -0.69
Pkd1O08852 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1O08852 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.72□□□□□ -0.69
Pkd1O08852 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Pkd1O08852 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.72□□□□□ -0.69
Pkd1O08852 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1O08852 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.72□□□□□ -0.69
Pkd1O08852 Gm26308-201ENSMUST00000157768 69 ntBASIC10.72□□□□□ -0.69
Pkd1O08852 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.72□□□□□ -0.69
Pkd1O08852 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC10.72□□□□□ -0.69
Pkd1O08852 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1O08852 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pkd1O08852 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.72□□□□□ -0.69
Pkd1O08852 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pkd1O08852 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Pkd1O08852 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.71□□□□□ -0.69
Pkd1O08852 Grk6-206ENSMUST00000224995 2971 ntBASIC10.71□□□□□ -0.69
Pkd1O08852 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pkd1O08852 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.71□□□□□ -0.69
Pkd1O08852 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.71□□□□□ -0.69
Pkd1O08852 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.71□□□□□ -0.69
Pkd1O08852 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.71□□□□□ -0.69
Pkd1O08852 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.71□□□□□ -0.7
Pkd1O08852 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1O08852 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Pkd1O08852 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1O08852 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1O08852 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.71□□□□□ -0.7
Pkd1O08852 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1O08852 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pkd1O08852 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Pkd1O08852 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms