Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13d-3J3QMG8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Gm37055-201ENSMUST00000191866 133 ntBASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-3J3QMG8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Gm27463-201ENSMUST00000183569 57 ntBASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-3J3QMG8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Gm18958-201ENSMUST00000174258 762 ntBASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-3J3QMG8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-3J3QMG8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms