Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Gm11336-201ENSMUST00000118168 334 ntBASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Gm25116-201ENSMUST00000157191 122 ntBASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 AV026068-213ENSMUST00000223675 1171 ntBASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx1-1G3UXB3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Gm25990-201ENSMUST00000102440 86 ntBASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Gm13312-201ENSMUST00000119631 718 ntBASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Gm44146-201ENSMUST00000203508 816 ntBASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nkx1-1G3UXB3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Nkx1-1G3UXB3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Nkx1-1G3UXB3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Nkx1-1G3UXB3 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Gm36991-201ENSMUST00000191800 648 ntBASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx1-1G3UXB3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Gm13313-201ENSMUST00000118938 1084 ntBASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx1-1G3UXB3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Gm13333-201ENSMUST00000119424 781 ntBASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Gm27628-201ENSMUST00000184911 107 ntBASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Gm8396-201ENSMUST00000057361 823 ntBASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx1-1G3UXB3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Gm37629-201ENSMUST00000193635 1050 ntBASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 AC155266.1-201ENSMUST00000220762 904 ntBASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 CT009495.1-201ENSMUST00000224221 862 ntBASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx1-1G3UXB3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.29■□□□□ 0.68
Nkx1-1G3UXB3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx1-1G3UXB3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx1-1G3UXB3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nkx1-1G3UXB3 Gm13418-201ENSMUST00000119097 944 ntBASIC19.29■□□□□ 0.68
Nkx1-1G3UXB3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms