Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.33■□□□□ 0.85
NpcdF8VQB8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
NpcdF8VQB8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.33■□□□□ 0.85
NpcdF8VQB8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NpcdF8VQB8 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.33■□□□□ 0.85
NpcdF8VQB8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NpcdF8VQB8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NpcdF8VQB8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Gm11336-201ENSMUST00000118168 334 ntBASIC20.32■□□□□ 0.84
NpcdF8VQB8 Rprl3-201ENSMUST00000157400 290 ntBASIC20.32■□□□□ 0.84
NpcdF8VQB8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.32■□□□□ 0.84
NpcdF8VQB8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NpcdF8VQB8 Grk6-206ENSMUST00000224995 2971 ntBASIC20.31■□□□□ 0.84
NpcdF8VQB8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Gm15467-201ENSMUST00000120582 445 ntBASIC20.31■□□□□ 0.84
NpcdF8VQB8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.31■□□□□ 0.84
NpcdF8VQB8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NpcdF8VQB8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NpcdF8VQB8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NpcdF8VQB8 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.29■□□□□ 0.84
NpcdF8VQB8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NpcdF8VQB8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms