Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh11xF6ZNL5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh11xF6ZNL5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh11xF6ZNL5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh11xF6ZNL5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdh11xF6ZNL5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh11xF6ZNL5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh11xF6ZNL5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh11xF6ZNL5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh11xF6ZNL5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms