Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.54■□□□□ 0.08
TprF6ZDS4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.54■□□□□ 0.08
TprF6ZDS4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TprF6ZDS4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
TprF6ZDS4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TprF6ZDS4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TprF6ZDS4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.53■□□□□ 0.08
TprF6ZDS4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.53■□□□□ 0.08
TprF6ZDS4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.53■□□□□ 0.08
TprF6ZDS4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.53■□□□□ 0.08
TprF6ZDS4 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.53■□□□□ 0.08
TprF6ZDS4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.53■□□□□ 0.08
TprF6ZDS4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Gm15467-201ENSMUST00000120582 445 ntBASIC15.53■□□□□ 0.08
TprF6ZDS4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.53■□□□□ 0.08
TprF6ZDS4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.53■□□□□ 0.08
TprF6ZDS4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TprF6ZDS4 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.53■□□□□ 0.08
TprF6ZDS4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TprF6ZDS4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TprF6ZDS4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TprF6ZDS4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.52■□□□□ 0.08
TprF6ZDS4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.52■□□□□ 0.08
TprF6ZDS4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TprF6ZDS4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TprF6ZDS4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TprF6ZDS4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TprF6ZDS4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TprF6ZDS4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.51■□□□□ 0.07
TprF6ZDS4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.51■□□□□ 0.07
TprF6ZDS4 Gm1401-201ENSMUST00000122048 772 ntBASIC15.51■□□□□ 0.07
TprF6ZDS4 Gm14822-201ENSMUST00000122247 291 ntBASIC15.51■□□□□ 0.07
TprF6ZDS4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TprF6ZDS4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.51■□□□□ 0.07
TprF6ZDS4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TprF6ZDS4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TprF6ZDS4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.5■□□□□ 0.07
TprF6ZDS4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TprF6ZDS4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TprF6ZDS4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.49■□□□□ 0.07
TprF6ZDS4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TprF6ZDS4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TprF6ZDS4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TprF6ZDS4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.49■□□□□ 0.07
TprF6ZDS4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TprF6ZDS4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms