Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.36■□□□□ 0.85
Ube4aE9Q735 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Ube4aE9Q735 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.35■□□□□ 0.85
Ube4aE9Q735 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ube4aE9Q735 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.35■□□□□ 0.85
Ube4aE9Q735 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Gm15372-201ENSMUST00000120729 834 ntBASIC20.34■□□□□ 0.85
Ube4aE9Q735 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.34■□□□□ 0.85
Ube4aE9Q735 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ube4aE9Q735 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ube4aE9Q735 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ube4aE9Q735 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ube4aE9Q735 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ube4aE9Q735 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.33■□□□□ 0.85
Ube4aE9Q735 Gm27459-201ENSMUST00000184860 107 ntBASIC20.33■□□□□ 0.85
Ube4aE9Q735 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ube4aE9Q735 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ube4aE9Q735 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.32■□□□□ 0.84
Ube4aE9Q735 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.31■□□□□ 0.84
Ube4aE9Q735 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.31■□□□□ 0.84
Ube4aE9Q735 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ube4aE9Q735 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4aE9Q735 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ube4aE9Q735 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms