Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Gm7506-201ENSMUST00000207758 815 ntBASIC9.51□□□□□ -0.89
Herc1E9PZP8 Gm45612-201ENSMUST00000211320 160 ntBASIC9.51□□□□□ -0.89
Herc1E9PZP8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.51□□□□□ -0.89
Herc1E9PZP8 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.51□□□□□ -0.89
Herc1E9PZP8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Thap2-203ENSMUST00000218989 527 ntBASIC9.51□□□□□ -0.89
Herc1E9PZP8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Gm12138-201ENSMUST00000122180 951 ntBASIC9.51□□□□□ -0.89
Herc1E9PZP8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Herc1E9PZP8 Mir1247-201ENSMUST00000116706 82 ntBASIC9.5□□□□□ -0.89
Herc1E9PZP8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Gm4899-201ENSMUST00000178708 719 ntBASIC9.5□□□□□ -0.89
Herc1E9PZP8 Mir6990-201ENSMUST00000183724 91 ntBASIC9.5□□□□□ -0.89
Herc1E9PZP8 Gm6180-201ENSMUST00000065243 498 ntBASIC9.5□□□□□ -0.89
Herc1E9PZP8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.5□□□□□ -0.89
Herc1E9PZP8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.5□□□□□ -0.89
Herc1E9PZP8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC9.5□□□□□ -0.89
Herc1E9PZP8 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.5□□□□□ -0.89
Herc1E9PZP8 AC127349.1-201ENSMUST00000224590 266 ntBASIC9.5□□□□□ -0.89
Herc1E9PZP8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Herc1E9PZP8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.49□□□□□ -0.89
Herc1E9PZP8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC9.49□□□□□ -0.89
Herc1E9PZP8 Mir449b-201ENSMUST00000104833 80 ntBASIC9.49□□□□□ -0.89
Herc1E9PZP8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Gm8825-201ENSMUST00000182565 998 ntBASIC9.49□□□□□ -0.89
Herc1E9PZP8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC9.49□□□□□ -0.89
Herc1E9PZP8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.49□□□□□ -0.89
Herc1E9PZP8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.49□□□□□ -0.89
Herc1E9PZP8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms