Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh17E9PXF0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh17E9PXF0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh17E9PXF0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Gm7284-201ENSMUST00000131667 944 ntBASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Ank2-226ENSMUST00000189368 339 ntBASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh17E9PXF0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh17E9PXF0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh17E9PXF0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms