Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm24270-201ENSMUST00000102326 57 ntBASIC23.82■■□□□ 1.4
Hfm1D3Z4R1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC23.82■■□□□ 1.4
Hfm1D3Z4R1 Gm24245-201ENSMUST00000157318 57 ntBASIC23.82■■□□□ 1.4
Hfm1D3Z4R1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hfm1D3Z4R1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC23.82■■□□□ 1.4
Hfm1D3Z4R1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hfm1D3Z4R1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hfm1D3Z4R1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hfm1D3Z4R1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hfm1D3Z4R1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hfm1D3Z4R1 Gm6736-201ENSMUST00000166583 948 ntBASIC23.79■■□□□ 1.4
Hfm1D3Z4R1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hfm1D3Z4R1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hfm1D3Z4R1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hfm1D3Z4R1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hfm1D3Z4R1 Gfra2-202ENSMUST00000227633 1480 ntBASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Gm25745-201ENSMUST00000174945 133 ntBASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Gm2756-201ENSMUST00000195851 400 ntBASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hfm1D3Z4R1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Gm14494-201ENSMUST00000118786 435 ntBASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Gm15173-201ENSMUST00000122049 433 ntBASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Hfm1D3Z4R1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 Dmtn-210ENSMUST00000228824 2377 ntBASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 Gm14140-201ENSMUST00000119999 995 ntBASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms