Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Gm27463-201ENSMUST00000183569 57 ntBASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf3B2RUQ2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Mir8112-201ENSMUST00000184382 131 ntBASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf3B2RUQ2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.12□□□□□ -0.15
Usf3B2RUQ2 Gm13401-201ENSMUST00000117074 291 ntBASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf3B2RUQ2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usf3B2RUQ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Gm2274-201ENSMUST00000184539 609 ntBASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usf3B2RUQ2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms