Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a6B1AVK5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Gm7230-201ENSMUST00000173026 815 ntBASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Gm8000-201ENSMUST00000188378 592 ntBASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a6B1AVK5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Gm7506-201ENSMUST00000207758 815 ntBASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Gm5364-201ENSMUST00000216789 889 ntBASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a6B1AVK5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Col4a6B1AVK5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a6B1AVK5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Gm11594-201ENSMUST00000122313 162 ntBASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Gm25745-201ENSMUST00000174945 133 ntBASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col4a6B1AVK5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms