Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Chd3B1AR17 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd3B1AR17 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd3B1AR17 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd3B1AR17 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.58■□□□□ 0.25
Chd3B1AR17 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Chd3B1AR17 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd3B1AR17 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd3B1AR17 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd3B1AR17 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Chd3B1AR17 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.58■□□□□ 0.25
Chd3B1AR17 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd3B1AR17 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.58■□□□□ 0.24
Chd3B1AR17 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chd3B1AR17 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd3B1AR17 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.57■□□□□ 0.24
Chd3B1AR17 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd3B1AR17 Gm13186-201ENSMUST00000118031 316 ntBASIC16.57■□□□□ 0.24
Chd3B1AR17 Gm44450-201ENSMUST00000199528 114 ntBASIC16.57■□□□□ 0.24
Chd3B1AR17 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd3B1AR17 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.57■□□□□ 0.24
Chd3B1AR17 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chd3B1AR17 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd3B1AR17 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Gm18115-201ENSMUST00000221209 621 ntBASIC16.57■□□□□ 0.24
Chd3B1AR17 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd3B1AR17 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.56■□□□□ 0.24
Chd3B1AR17 Gm9103-201ENSMUST00000119371 405 ntBASIC16.56■□□□□ 0.24
Chd3B1AR17 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.56■□□□□ 0.24
Chd3B1AR17 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd3B1AR17 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd3B1AR17 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.55■□□□□ 0.24
Chd3B1AR17 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chd3B1AR17 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chd3B1AR17 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Gm14859-201ENSMUST00000117752 357 ntBASIC16.55■□□□□ 0.24
Chd3B1AR17 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd3B1AR17 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd3B1AR17 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms