Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn1aA2APX8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn1aA2APX8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn1aA2APX8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Scn1aA2APX8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.78■□□□□ 0.44
Scn1aA2APX8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn1aA2APX8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scn1aA2APX8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn1aA2APX8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.77■□□□□ 0.43
Scn1aA2APX8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.77■□□□□ 0.43
Scn1aA2APX8 Gm27704-201ENSMUST00000185094 107 ntBASIC17.77■□□□□ 0.43
Scn1aA2APX8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.77■□□□□ 0.43
Scn1aA2APX8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn1aA2APX8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn1aA2APX8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.75■□□□□ 0.43
Scn1aA2APX8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.75■□□□□ 0.43
Scn1aA2APX8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.75■□□□□ 0.43
Scn1aA2APX8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.75■□□□□ 0.43
Scn1aA2APX8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.75■□□□□ 0.43
Scn1aA2APX8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.75■□□□□ 0.43
Scn1aA2APX8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn1aA2APX8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scn1aA2APX8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.74■□□□□ 0.43
Scn1aA2APX8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.74■□□□□ 0.43
Scn1aA2APX8 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.74■□□□□ 0.43
Scn1aA2APX8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn1aA2APX8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn1aA2APX8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms