Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav12d-1A0N8R0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-1A0N8R0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav12d-1A0N8R0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Dio3-201ENSMUST00000097228 1449 ntBASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Dancr-204ENSMUST00000132389 2347 ntBASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12d-1A0N8R0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Gm18284-201ENSMUST00000172604 624 ntBASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms