Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc112A0AUP1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc112A0AUP1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Gm17661-201ENSMUST00000170317 270 ntBASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc112A0AUP1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Gm12527-201ENSMUST00000117967 564 ntBASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Trmt13-210ENSMUST00000198454 880 ntBASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc112A0AUP1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc112A0AUP1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc112A0AUP1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Gm37025-201ENSMUST00000195159 829 ntBASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms