Protein–RNA interactions for Protein: A0A0R3P9D1

Gm42688, Predicted gene 42688, mousemouse

Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42688A0A0R3P9D1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Mir8117-201ENSMUST00000184773 107 ntBASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Gm42688A0A0R3P9D1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gm42688A0A0R3P9D1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm42688A0A0R3P9D1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm11025-201ENSMUST00000140773 466 ntBASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm27321-201ENSMUST00000185021 205 ntBASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gm42688A0A0R3P9D1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm42688A0A0R3P9D1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm14701-201ENSMUST00000117156 348 ntBASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Idnk-204ENSMUST00000226010 1898 ntBASIC18.99■□□□□ 0.63
Gm42688A0A0R3P9D1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm43438-201ENSMUST00000198133 379 ntBASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm42688A0A0R3P9D1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm42688A0A0R3P9D1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm42688A0A0R3P9D1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm42688A0A0R3P9D1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.96■□□□□ 0.63
Gm42688A0A0R3P9D1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Gm42688A0A0R3P9D1 Gm11780-201ENSMUST00000136880 516 ntBASIC18.96■□□□□ 0.63
Gm42688A0A0R3P9D1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm42688A0A0R3P9D1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm42688A0A0R3P9D1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms