Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm12382-201ENSMUST00000122005 922 ntBASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm42545-201ENSMUST00000202755 922 ntBASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-4A0A0G2JG01 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13n-4A0A0G2JG01 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13n-4A0A0G2JG01 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13n-4A0A0G2JG01 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13n-4A0A0G2JG01 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-4A0A0G2JG01 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav13n-4A0A0G2JG01 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav13n-4A0A0G2JG01 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms