Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm21814-202ENSMUST00000203277 873 ntBASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm30025-201ENSMUST00000218555 728 ntBASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Odf3b-204ENSMUST00000227834 930 ntBASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm7977-201ENSMUST00000193787 748 ntBASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm43799-201ENSMUST00000201845 579 ntBASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm9987-201ENSMUST00000069768 567 ntBASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms