Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.76□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C920008G01RikA0A0B4J1N1 Gm27801-201ENSMUST00000184174 223 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms