Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm18421-201ENSMUST00000204122 625 ntBASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm29707-201ENSMUST00000196325 491 ntBASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm10819-201ENSMUST00000099988 561 ntBASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm14859-201ENSMUST00000117752 357 ntBASIC17.27■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.27■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Ank2-226ENSMUST00000189368 339 ntBASIC17.27■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Igkv5-43A0A0B4J1J2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.27■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Igkv5-43A0A0B4J1J2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.27■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gm45328-201ENSMUST00000210942 917 ntBASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv5-43A0A0B4J1J2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms