Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm18733-201ENSMUST00000173950 856 ntBASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm18195-201ENSMUST00000207604 706 ntBASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Rps4l-201ENSMUST00000071745 943 ntBASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Igkv16-104A0A0B4J1I1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gm44430-201ENSMUST00000203376 995 ntBASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv16-104A0A0B4J1I1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms